MIPS: Metal Interactions in Protein Structures
A database on all the metal containing proteins available in Protein Data Bank. MIPS allows the user to access the quantitative information of proteins containing metals. Set the parameters and search for metal containing proteins.Click on the interaction option below to view the interactions of a particular metal with protein residues, water molecules, ligand molecules and metal ions.The number of interacting molecules is also specified.
Parameters
Experimental method
X-Ray Diffraction
NMR Model
Resolution
Between
Better than
Worse than
Exactly
Any
Å
R-Factor
Between
Better than
Worse than
Exactly
Any
%
Search
All available structures
25% non-homologous structures
90% non-homologous structures
Select a particular metal ion
AG
AL
AR
AS
AU
B
BA
BR
CA
CD
CE
CL
CO
CR
CS
CU
EU
F
FE
GA
GD
HG
HO
I
IN
IR
K
KR
LI
LU
MG
MN
MO
NA
NI
OS
PB
PD
PR
PT
RB
RE
RH
RU
SB
SE
SM
SR
TB
TE
TL
U1
V
W
XE
Y1
YB
ZN
Number of metal(s)
greater than or equal to
less than or equal to
exactly
between
Search for metal interactions
Interaction of a particular metal ion
With protein residue(s) only
Name of the residue
ANY
ALA
ARG
ASN
ASP
CYS
GLN
GLU
GLY
HIS
ILE
LEU
LYS
MET
PHE
PRO
SER
THR
TRP
TYR
VAL
Number of protein residue(s)
greater than or equal to
less than or equal to
exactly
between
With water molecule(s) only
Number of water molecule(s)
greater than or equal to
less than or equal to
exactly
between
With ligand molecule(s) only
Name of the ligand
Number of ligand(s)
greater than or equal to
less than or equal to
exactly
between
With other metal(s) only
Name of the metal
Number of metal(s)
greater than or equal to
less than or equal to
exactly
between
Combination of the above four options
Number of residue(s)
greater than or equal to
less than or equal to
exactly
between
Number of water molecule(s)
greater than or equal to
less than or equal to
exactly
between
Number of ligand(s)
greater than or equal to
less than or equal to
exactly
between
Number of metal(s)
greater than or equal to
less than or equal to
exactly
between
With any residue in the protein structure
Number of residue(s)
greater than or equal to
less than or equal to
exactly
between
Select interaction distance (Å)
Min
Max
List of all metal containing proteins available in MIPS database
© Database developed and maintained by Prof. K. Sekar's Group @ CDS, Indian Institute of Science, Bangalore, India.